Cross-species comparison significantly improves genome-wide prediction of cis-regulatory modules in Drosophila
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* Corresponding author: Saurabh Sinha saurabh@lonnrot.rockefeller.edu
BMC Bioinformatics 2004, 5:129 doi:10.1186/1471-2105-5-129
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BioMed Central: 6 citations
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Method
Boolean implication networks derived from large scale, whole genome microarray datasets Debashis Sahoo, David L Dill, Andrew J Gentles, Robert Tibshirani, Sylvia K Plevritis Genome Biology 2008, 9:R157 (30 October 2008) A method for analysis of microarray data is presented that extracts statistically significant Boolean implication relationships between pairs of genes. |
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Proceedings
Byoung-Chul Kim, Woo-Yeon Kim, Daeui Park, Won-Hyong Chung, Kwang-sik Shin, Jong Bhak BMC Bioinformatics 2008, 9(Suppl 1):S2 (13 February 2008) |
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Research
Evolution of insect proteomes: insights into synapse organization and synaptic vesicle life cycle Chava Yanay, Noa Morpurgo, Michal Linial Genome Biology 2008, 9:R27 (7 February 2008) A comparative study of human versus insects sheds light on the composition and assembly of protein complexes in the insect synapse. |
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Review
Finding regulatory elements and regulatory motifs: a general probabilistic framework Erik van Nimwegen BMC Bioinformatics 2007, 8(Suppl 6):S4 (27 September 2007) |
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Methodology article
Statistical significance of cis-regulatory modules Dustin E Schones, Andrew D Smith, Michael Q Zhang BMC Bioinformatics 2007, 8:19 (22 January 2007) |
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Research article
Daniel A Pollard, Alan M Moses, Venky N Iyer, Michael B Eisen BMC Bioinformatics 2006, 7:376 (14 August 2006) |