Handling multiple testing while interpreting microarrays with the Gene Ontology Database
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* Corresponding author: Michael V Osier michael@bioinformatics.rit.edu
BMC Bioinformatics 2004, 5:124 doi:10.1186/1471-2105-5-124
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Research article
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FUNC: a package for detecting significant associations between gene sets and ontological annotations Kay Prüfer, Bjoern Muetzel, Hong-Hai Do, Gunter Weiss, Philipp Khaitovich, Erhard Rahm, Svante Pääbo, Michael Lachmann, Wolfgang Enard BMC Bioinformatics 2007, 8:41 (6 February 2007) |
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GO-2D: identifying 2-dimensional cellular-localized functional modules in Gene Ontology Jing Zhu, Jing Wang, Zheng Guo, Min Zhang, Da Yang, Yanhui Li, Dong Wang, Guohua Xiao BMC Genomics 2007, 8:30 (24 January 2007) |
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BayGO: Bayesian analysis of ontology term enrichment in microarray data Ricardo ZN Vêncio, Tie Koide, Suely L Gomes, Carlos A de B Pereira BMC Bioinformatics 2006, 7:86 (23 February 2006) Searching for enriched ontology terms in microarray data is improved by an innovative, freely available Bayesian approach that accounts for genes missed in the analysis, offering an advance on 'frequentist' approaches.
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