Research article
Cross-platform comparison and visualisation of gene expression data using co-inertia analysis
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* Corresponding author: Aedín C Culhane Aedin.Culhane@ucd.ie
1 Department of Biochemistry, Biosciences Institute, University College Cork, Cork, Ireland
2 Laboratoire de Biométrie et Biologie Évolutive, UMR CNRS n°5558 Université Claude Bernard – Lyon 1, 43, bd. du 11 Novembre 1918, 69622 Villeurbanne Cedex, France
BMC Bioinformatics 2003, 4:59 doi:10.1186/1471-2105-4-59
Published: 21 November 2003Additional files
Additional File 1:
Ross_5643.zip is a Microsoft Excel file that is compressed using winzip 8.0. It contains the pre-processed Ross (spotted microarray) data subsets described in this manuscript. The excel file contains 5 worksheets; the first is a readme which gives further details of the data. In addition details of the data contained in this file are given in additional file 2 'Readme.txt'.
Format: ZIP Size: 5.2MB Download file
Additional File 2:
Staunton_7129.zip is a Microsoft Excel file that is compressed using winzip 8.0. It contains the pre-processed Staunton (Affymetrix) data subsets described in this manuscript. The excel file contains 7 worksheets; the first is a readme which gives further details of the data. In addition details of the data contained in this file are given in additional file 2 'Readme.txt'.
Format: ZIP Size: 5.1MB Download file
Additional File 3:
Readme.pdf is a pdf (abode) file, which describes the pre-processed data, contained in additional files 1, 2, 4, 5.
Format: PDF Size: 118KB Download file
This file can be viewed with: Adobe Acrobat Reader
Additional File 4:
Ross_5643_KNN.txt is a tab delimited plain text file. Ross_5643_KNN.txt is worksheet 4 from Ross_5643.zip. This 5643 gene subset of the Ross data is described in detail in the manuscript. The IMAGE clone identifiers are in the first column, and sample (array) names in the first row.
Format: TXT Size: 2.1MB Download file
Additional File 5:
Staunton_1517_CS.txt is a tab delimited plain text file. Staunton_1517_CS.txt is worksheet 3 from Staunton_7129.zip. This 1517 gene subset of the Staunton data is described in detail in the manuscript. The Affymetrix probe identifiers are in the first column, and sample (array) names in the first row.
Format: TXT Size: 914KB Download file
Additional File 6:
Further details on the mathematical model of CIA
Format: PDF Size: 84KB Download file
This file can be viewed with: Adobe Acrobat Reader