Table 3 |
||||
|
Statistical test of gene expression at gene level. |
||||
|
EC_ID |
Enzyme_Name |
Locus |
Signficance |
Regulation |
|
|
||||
|
1.2.1.12 |
Glyceraldehyde 3-phosphate dehydrogenase |
At1g13440 |
S |
Up |
|
At3g26650 |
S |
Up |
||
|
At3g04120 |
S |
Down |
||
|
At1g79530 |
NS |
|||
|
At1g16300 |
S |
Up |
||
|
At1g12900 |
S |
Up |
||
|
At1g42970 |
NS |
|||
|
2.2.1.1 |
Transketolase. |
At2g45290 |
NS |
|
|
At3g60750 |
S |
Up |
||
|
2.6.1.2 |
Alanine aminotransferase. |
At1g23310 |
S |
Up |
|
2.7.1.19 |
Phosphoribulokinase. |
At1g32060 |
S |
Up |
|
2.7.2.3 |
Phosphoglycerate kinase. |
At1g56190 |
S |
Up |
|
At1g79550 |
S |
Down |
||
|
At3g12780 |
S |
Up |
||
|
3.1.3.11 |
Fructose-bisphosphatase. |
At1g43670 |
NS |
|
|
At3g54050 |
S |
Up |
||
|
3.1.3.37 |
Sedoheptulose-bisphosphatase. |
At3g55800 |
S |
Up |
|
4.1.1.39 |
Ribulose-bisphosphate carboxylase. |
At1g67090 |
S |
Up |
|
At5g38430 |
S |
Up |
||
|
At5g38410 |
S |
Up |
||
|
At5g38420 |
S |
Up |
||
|
4.1.2.13 |
Fructose-bisphosphate aldolase. |
At2g01140 |
NS |
|
|
At2g21330 |
S |
Up |
||
|
At2g36460 |
NS |
|||
|
At3g52930 |
S |
Up |
||
|
At4g26530 |
NS |
|||
|
At4g38970 |
S |
Up |
||
|
5.3.1.1 |
Triosephosphate isomerase. |
At3g55440 |
NS |
|
|
At2g21170 |
S |
Up |
||
|
|
||||
|
This is an example to identify genes that are affected by experimental treatment for the Calvin cycle pathway. S means significant and NS means non-significant. Significance level is 0.05. |
||||
|
Pan et al. BMC Bioinformatics 2003 4:56 doi:10.1186/1471-2105-4-56 |
||||
