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Resolution: standard / high Figure 5.
The sum of distance, the sum of all the shortest paths from a superfamily to every other superfamily in the network. Blue indicates low sum of distance (central) and red high sum of distance (rim). The 6 superfamilies with lowest sum of distance are c.37.1, P-loop containing nucleotide triphosphate hydrolases; b.1.1, Immunoglobulin; d.153.1, N-terminal nucleophile aminohydrolases (Ntn hydrolases); a.118.1, ARM repeat; c.26.1, Nucleotidylyl transferase; a.4.5, Winged helix DNA-binding domain
Bolser et al. BMC Bioinformatics 2003 4:45 doi:10.1186/1471-2105-4-45 |