|
Codon usage for Human CoronaVirus 229E (HCoV). |
|||||
| Amino Acid |
Codon |
Usage/% |
Amino Acid |
Codon |
Usage/% |
|
|
|||||
| Arg |
CGU |
1.04 |
Ile |
AUU |
3.34 |
| CGC |
0.41 |
AUC |
0.74 |
||
| CGA |
0.17 |
AUA |
1.35 |
||
| CGG |
0.13 |
Gly |
GGU |
4.12 |
|
| AGA |
1.23 |
GGC |
1.43 |
||
| AGG |
0.36 |
GGA |
0.67 |
||
| Leu |
UUA |
1.49 |
GGG |
0.22 |
|
| UUG |
2.96 |
Val |
GUU |
6.00 |
|
| CUU |
2.48 |
GUC |
1.23 |
||
| CUC |
0.46 |
GUA |
1.09 |
||
| CUA |
0.65 |
GUG |
1.90 |
||
| CUG |
0.63 |
Lys |
AAA |
3.15 |
|
| Ser |
UCU |
2.70 |
AAG |
2.31 |
|
| UCC |
0.66 |
Asn |
AAU |
4.15 |
|
| UCA |
1.37 |
AAC |
1.82 |
||
| UCG |
0.20 |
Gln |
CAA |
2.04 |
|
| AGU |
1.86 |
CAG |
1.17 |
||
| AGC |
0.71 |
his |
CAU |
1.14 |
|
| Thr |
ACU |
3.23 |
CAC |
0.46 |
|
| ACC |
0.76 |
Glu |
GAA |
2.81 |
|
| ACA |
2.21 |
GAG |
1.21 |
||
| ACG |
0.29 |
Asp |
GAU |
3.09 |
|
| Pro |
CCU |
1.6S |
GAC |
1.96 |
|
| CCC |
0.35 |
Tyr |
UAU |
3.00 |
|
| CCA |
1.07 |
UAC |
1.46 |
||
| CCG |
0.19 |
Cys |
UGU |
2.26 |
|
| Ala |
GCU |
3.58 |
UGC |
0.95 |
|
| GCC |
0.83 |
Phe |
UUU |
4.59 |
|
| GCA |
1.80 |
UUC |
1.10 |
||
| GCG |
0.42 |
||||
|
The relative usage of synonymous codons in the 24 known CDSs of Human Corona Virus 229E (HCoV). | |||||
Yap et al. BMC Bioinformatics 2003 4:43 doi:10.1186/1471-2105-4-43 |
|||||