Table 3

Study of recently detected binding peptides from proteins P17944, P17451, P31952 and P17944, binding to HLA-A*0201. The known binding nonamers and the rank of these with the different predictors are shown. Although all three methods detects these peptides, they are found at higher ranks using SVMHC than with the other methods.

Protein

No.

SVMHC

HLA_BIND

SYFPEITHI

P78395

2

1,6

3,23

2,8

P17944

2

1,2

1,3

4,6

P31952

1

2

4

14

P17451

3

2,3,4

1,4,12

1,6,10

Dönnes and Elofsson BMC Bioinformatics 2002 3:25   doi:10.1186/1471-2105-3-25