Figure 4.

iMetAMOS validation output for an example dataset. The leftmost tab allows navigation to view the output of each pipeline step. The selected “Validation” tab results are shown in the main window. These include the validation metrics of all successful assemblies, including a comparison and QUAST [13] report against an automatically recruited reference genome from NCBI RefSeq. The validation tab also indicates the sample shows signs of contamination. Finally, the rightmost tab shows a quick summary of the winning assembly (# reads, #contigs, # orfs). MaSuRCA did not run on this sample because it requires paired-end input.

Koren et al. BMC Bioinformatics 2014 15:126   doi:10.1186/1471-2105-15-126
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