Table 1

Reference genomes and libraries for public datasets (Allpaths-LG corrected)

Organism

Genome length (bp)

Library

Avg Read length (bp)

Insert size (bp)

Coverage


S. aureus

2,903,081

Fragment

101

180

29X


Short jump

96

3500

32X


R. sphaeroides

4,603,060

Fragment

101

180

31X


Short jump

101

3500

29X


Human chr14

88,289,540

Fragment

101

180

39X


Short jump

96

3000

12X


Long jump

96

35000

0.2X


Vicedomini et al. BMC Bioinformatics 2013 14(Suppl 7):S6   doi:10.1186/1471-2105-14-S7-S6

Open Data