Table 3

Results for knockout strains derived by MOMAKnock on the iAF1260 E. coli metabolic network

MOMAKnock

MOMA Flux


K

Knockouts

Succi

Biomass

Succi

Biomass

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3

q8+succ→fum+q8h2, 6pgl+h2o→6pgc+h, (2)h2o + o2 + urate → alltn + co2 + h2o2

39.30

5.02

27.45

5.02

906.49

4

q8+succ→fum+q8h2, ac + atp → actp + adp, h2o+methf→10fthf+h, r5p+xu5p-D→g3p+s7p

67.08

5.02

63.23

5.02

402.33

5

q8+succ→fum+q8h2, glu-L+h→4abut+co2, 3pg+nad→3php+h+nadh, 3php+glu-L→akg+pser-L, 6pgc+nadp→co2+nadph+ ru5p-D

74.94

5.02

66.67

5.02

464.76


Ren et al. BMC Bioinformatics 2013 14(Suppl 2):S17   doi:10.1186/1471-2105-14-S2-S17

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