Table 1

Summary of B-cell epitope datasets used in this study.

Dataset

Sollner

AntiJen#1

AntiJen#2

HIV

Pellequer

PC

Benchmark


Number of proteins

57

124

171

10

14

12

52

Epitope residue

2,317

5,529

11,249

1,018

858

1,852

858

Non-epitope residue

43,690

60,800

75,805

1,693

1,695

3,509

9,527

Number of residues

46,007

66,329

87,054

2,711

2,553

5,361

10,385

Epitope density

5.04%

8.34%

12.92%

37.55%

33.61%

34.55%

8.26%


Lin et al. BMC Bioinformatics 2013 14(Suppl 2):S10   doi:10.1186/1471-2105-14-S2-S10

Open Data