Table 8

Number of SNVs called by GATK-UGT with different cutoffs of genotype quality
Cutoffs SNVs dbSNPs Non-dbSNPs
≥ 0 729 478 251
≥ 5 724 476 248
≥ 6 723 476 247
≥ 7 681 450 231
≥ 8 681 450 231
≥ 9 676 446 230
≥ 10 476 217 259

Yu and Sun

Yu and Sun BMC Bioinformatics 2013 14:274   doi:10.1186/1471-2105-14-274

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