Table 4

Key metrics in each of the four algorithms
Metrics
SOAPsnp Consensus score [0, 99]
Atlas-SNP2 Posterior Probability
SAMtools Genotype quality [0,99], QUAL
GATK-UGT Genotype quality [0,99], QUAL, FisherStrand, HaplotypeScore, MappingQualityRankSumTest, ReadPosRankSumTest

Yu and Sun

Yu and Sun BMC Bioinformatics 2013 14:274   doi:10.1186/1471-2105-14-274

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