Table 3

Regions with local enrichment of TFBSs of ETS domain TFs
Species Tissues or cell types (cluster index) Region of enrichment:
x1 to x2 ( h /2)
human T cells, NK cells (5) -141 to 51 (100)
human 721 B-lymphoblasts, BM CD34+ cells (11) -174 to 42 (100)
human 721 B-lymphoblasts, BM CD34+ cells (12) -151 to 37 (100)
human B cells, Burkitt's lymphoma (13) -148 to 23 (100)
human BM CD34+ cells, 721 B-lymphoblasts (14) -81 to 10 (50)
human NK cells, T cells (15) -97 to 34 (50)
mouse B cells, T cells (2) -106 to 17 (50)
mouse skeletal muscle, heart (4) -161 to 26 (100)
mouse thymus, ovary (6) -137 to 18 (100)
mouse testis (10) -133 to -58 (100)
mouse T cells, B cells (12) -133 to -98 (100)
mouse oocyte, fertilized egg (25) -139 to 42 (100)
mouse oocyte, fertilized egg (34) -240 to 34 (200)
mouse testis (35) -178 to 71 (200)
mouse oocyte, fertilized egg (37) -77 to -11 (50)

Region with local enrichment of ETS domain TF binding motifs were found in different sets of sequences. The species, and the tissues and cell types associated with the promoters in which the motif was found are listed, as well as the regions of local enrichment.

Vandenbon et al.

Vandenbon et al. BMC Bioinformatics 2013 14:26   doi:10.1186/1471-2105-14-26

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