A Parzen window-based approach for the detection of locally enriched transcription factor binding sites
1 Laboratory of Systems Immunology, Immunology Frontier Research Center, Osaka University, Osaka, Japan
2 Laboratory of Host Defense, Immunology Frontier Research Center, Osaka University, Osaka, Japan
3 Department of Host Defense, Research Institute for Microbial Diseases, Osaka University, Osaka, Japan
BMC Bioinformatics 2013, 14:26 doi:10.1186/1471-2105-14-26Published: 21 January 2013
Additional file 1:
Supplementary text and figures. A file containing supplementary material, including detailed description of methods and results, as well as supplementary figures and tables.
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Additional file 2:
Supplementary Tables S5, S6, and S11. A spreadsheet file containing predicted regions of local enrichment and globally enriched TFBS motifs for human and mouse GNF GeneAtlas datasets, and for the sets of promoters obtained from TLR-stimulated mouse DC cells.
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