|Example of statistics generated for the CNV analysis|
|Statistics for the entire analysis|
|Number of nodes||24|
|Number of F-nodes||12|
|Total number of output files||76|
|Total size of output files||2.32G|
|Total CPU time required||03:02:15.25|
|Statistics for a single node (distMatGfx)|
|Description||Produces an MDS visualization of the output of samplesDistMats|
|Output files||t_tani_distrib.pdf, t_tani_mds.pdf|
|Last build time||Sun Jan 8 03:51:56 2013|
|Required CPU time||00:01:25.08|
The statistics are updated at each run or modification of any part of the pipeline. They are included in the final HTML protocol generated by Pyleaf. F-nodes are nodes whose output is written in one or more files on the disk. The total required time is estimated by summing up all the time required by single nodes, since they are usually ran across different sessions. Documentation for each node includes also source code, which is not reported in the Table. In the original document the file names are hyperlinked with actual files on the disk.
Napolitano et al.
Napolitano et al. BMC Bioinformatics 2013 14:201 doi:10.1186/1471-2105-14-201