Table 2

Performance comparison of PEWCC, CMC, ClusterONE, MCL, CFinder, and MCODE, with A c c ( K , P ) ≥ 0 . 5
Cmplx-D1 Cmplx-D2
Method Matched Cmplx Prec Rec F1 Matched Cmplx Prec Rec F1
PEWCC 58 0.435 0.469 0.451 61 0.468 0.910 0.618
CMC 56 0.297 0.346 0.320 57 0.385 0.889 0.537
ClusterONE 52 0.204 0.387 0.267 48 0.231 0.872 0.365
MCL 51 0.353 0.315 0.333 52 0.448 0.825 0.581
MCODE 39 0.330 0.241 0.279 34 0.386 0.540 0.450
CFilter 46 0.379 0.284 0.325 43 0.463 0.683 0.552

Zaki et al.

Zaki et al. BMC Bioinformatics 2013 14:163   doi:10.1186/1471-2105-14-163

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