The taxonomic name resolution service: an online tool for automated standardization of plant names
1 Department of Ecology and Evolutionary Biology, University of Arizona Tucson, P.O. Box 210088, Tucson, AZ, 85721, USA
2 The iPlant Collaborative, Thomas W. Keating Bioresearch Building, 1657 East Helen Street, Tucson, AZ, 85721, USA
3 BIO5 Institute, 1657 East Helen Street, PO Box 210240, Tucson, AZ, 85721-0240, USA
4 Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, NY, 11724-2202, USA
5 7 MBL street, Center for Library and Informatics, Marine Biological Laboratory, 7 MBL Street, Woods Hole, MA, 02543, USA
6 Divisional Data Centre, CSIRO Marine and Atmospheric Research, GPO Box 1538, Hobart, Tasmania, 7001, Australia
7 Yale-NUS College, 6 College Avenue East, Singapore, 138614, Singapore
8 Missouri Botanical Garden, 4344 Shaw Blvd. |, St. Louis, MO, 63110, USA
9 Department of Biology, CB 3280, University of North Carolina, Chapel Hill, NC, 27599-3280, USA
10 The Santa Fe Institute, 1399 Hyde Park Road, Santa Fe, NM, 87501, USA
BMC Bioinformatics 2013, 14:16 doi:10.1186/1471-2105-14-16Published: 16 January 2013
Additional file 1:
Example R script which uses the TNRS API to correct names on a phylogeny.
Format: R Size: 2KB Download file
Additional file 2:
Taxonomic names used to compare performance of TNRS, Plantminer and GNResolver.
Format: CSV Size: 20KB Download file
Additional file 3:
List of submitted names, expected targets, and descriptions of errors for names which failed matching by one or more name resolution applications.
Format: XLSX Size: 54KB Download file