Table 3

Selected pathways from the functional analysis
Term Count p-value
Cluster 1 score: 11.39
Defense response GO:0006952 106 5.3E-14
Response to wonding GO:0006954 90 1.3E-11
Inflammatory response GO:0009611 63 1.0E-10
Cluster 2 score: 5.43
Response to molecule of lipopolysaccharide GO:0002237 23 9.4E-8
Response to cytokine stimulus GO:0034097 18 8.0E-5
Response to bacterium GO:0009617 31 3.5E-4
Cluster 3 score: 5.19
Regulation of cytokine production GO:0001817 41 2.9E-9
Positive regulation of cytokine production GO:0001819 20 8.0E-5
positive regulation of multicellular organismal process GO:0051240 35 1.1E-3
Cluster 8 score: 2.89
Regulation of apoptosis GO:0042981 100 1.0E-5
Regulation of programmed cell death GO:0043067 100 1.5E-5
Regulation of cell death GO:0010941 100 1.8E-5
Cluster 10 score: 2.72
Leukocyte activation GO:0045321 41 9.2E-6
Cell activation GO:0001775 46 1.1E-5
T cell activation GO:0046649 26 2.0E-5

Count column indicates the number of DAVID IDs associated with each pathway.

Chung et al.

Chung et al. BMC Bioinformatics 2013 14:110   doi:10.1186/1471-2105-14-110

Open Data