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Application of text-mining for updating protein post-translational modification annotation in UniProtKB

Anne-Lise Veuthey1*, Alan Bridge1, Julien Gobeill2, Patrick Ruch2, Johanna R McEntyre3, Lydie Bougueleret1 and Ioannis Xenarios145

Author Affiliations

1 Swiss-Prot group, SIB Swiss Institute of Bioinformatics, 1 Michel Servet, Geneva 4, 1211, Switzerland

2 BiTeM Group, Information Science Department, University of Applied Sciences, Carouge, 1227, Switzerland

3 EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK

4 Vital-IT group, SIB Swiss Institute of Bioinformatics, Quartier Sorge, Bâtiment Génopode, Lausanne, 1015, Switzerland

5 University of Lausanne, Lausanne, 1015, Switzerland

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BMC Bioinformatics 2013, 14:104  doi:10.1186/1471-2105-14-104

Published: 22 March 2013

Additional files

Additional file 1:

PTM vocabulary. List of tokens used to create the regular expressions.

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