Table 4

Application of GSEA to the MBEI pre-processed datasets

Gene set

MBEI

CB MBEI

ZS MBEI


ES

p-value

ES

p-value

ES

p-value


EGF pathway

-0.4793

0.0451

-0.4387

0.0647

-0.2616

0.6179

Stathmin pathway

-0.3323

0.5778

-0.3492

0.5848

-0.3551

0.5186

Homologous recombination

0.6516

0.0057

0.6533

0.0020

-0.3582

0.3836

BRCA1 pathway

0.3067

0.0746

0.3032

0.0763

0.3112

0.1509

HER2 pathway

0.3434

0.5098

0.3747

0.3727

0.38071

0.2003


Bevilacqua et al. BMC Bioinformatics 2012 13(Suppl 7):S9   doi:10.1186/1471-2105-13-S7-S9

Open Data