Table 5

Relative RMS (root-mean-squared) error

Structure

Version

Relative RMSE


H helix myoglobin

CPU with HCP

0.215821

GPU

0.000030

GPU with HCP

0.236093


nuclesome core particle

CPU with HCP

0.022950

GPU

0.000062

GPU with HCP

0.022853


chaperonin GroEL, 2eu1

CPU with HCP

0.008799

GPU

0.000042

GPU with HCP

0.008816


virus capsid

CPU with HCP

0.015376

GPU

0.000173

GPU with HCP

0.015273


Daga and Feng BMC Bioinformatics 2012 13(Suppl 5):S4   doi:10.1186/1471-2105-13-S5-S4

Open Data