Table 1 |
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|
Chimpanzee NumtS annotation as reported in the compilation limited to the mitochondrial region 1006-1771 considered in the Primer selection example |
|||||
|
#chrom |
chromStart |
chromEnd |
NumtS_ID |
score |
strand |
|
|
|||||
|
chrM |
318 |
2790 |
Ptr_NumtS_376_b1 |
983 |
+ |
|
chrM |
0 |
2116 |
Ptr_NumtS_443_b1 |
951 |
- |
|
chrM |
457 |
2391 |
Ptr_NumtS_442_b1 |
944 |
- |
|
chrM |
0 |
2512 |
Ptr_NumtS_379_b2 |
840 |
+ |
|
chrM |
0 |
2512 |
Ptr_NumtS_315_b2 |
838 |
+ |
|
chrM |
0 |
2831 |
Ptr_NumtS_667_b2 |
808 |
- |
|
chrM |
835 |
2448 |
Ptr_NumtS_127_b1 |
805 |
+ |
|
chrM |
0 |
2586 |
Ptr_NumtS_192_b2 |
794 |
+ |
|
chrM |
19 |
2227 |
Ptr_NumtS_106_b2 |
790 |
- |
|
chrM |
703 |
2783 |
Ptr_NumtS_371_b1 |
790 |
+ |
|
chrM |
21 |
5619 |
Ptr_NumtS_039_b1 |
786 |
- |
|
chrM |
79 |
2939 |
Ptr_NumtS_343_b2 |
785 |
- |
|
chrM |
0 |
2249 |
Ptr_NumtS_604_b1 |
779 |
- |
|
chrM |
0 |
2236 |
Ptr_NumtS_423_b1 |
775 |
+ |
|
chrM |
19 |
5841 |
Ptr_NumtS_073_b2 |
774 |
+ |
|
chrM |
4 |
4498 |
Ptr_NumtS_335_b2 |
770 |
+ |
|
chrM |
84 |
9112 |
Ptr_NumtS_194_b2 |
770 |
- |
|
chrM |
0 |
1786 |
Ptr_NumtS_516_b1 |
767 |
- |
|
chrM |
0 |
4603 |
Ptr_NumtS_088_b1 |
765 |
- |
|
chrM |
0 |
4321 |
Ptr_NumtS_699_b2 |
758 |
+ |
|
chrM |
0 |
4343 |
Ptr_NumtS_698_b1 |
758 |
- |
|
chrM |
0 |
4343 |
Ptr_NumtS_685_b1 |
758 |
- |
|
chrM |
0 |
4321 |
Ptr_NumtS_697_b2 |
757 |
+ |
|
chrM |
0 |
4321 |
Ptr_NumtS_693_b1 |
757 |
- |
|
chrM |
0 |
4343 |
Ptr_NumtS_700_b1 |
756 |
- |
|
chrM |
0 |
4321 |
Ptr_NumtS_695_b1 |
756 |
- |
|
chrM |
0 |
4321 |
Ptr_NumtS_694_b2 |
756 |
+ |
|
chrM |
0 |
4343 |
Ptr_NumtS_692_b2 |
756 |
+ |
|
chrM |
0 |
4343 |
Ptr_NumtS_691_b1 |
756 |
- |
|
chrM |
0 |
4321 |
Ptr_NumtS_690_b2 |
756 |
+ |
|
chrM |
0 |
4343 |
Ptr_NumtS_687_b1 |
756 |
- |
|
chrM |
0 |
4343 |
Ptr_NumtS_623_b3 |
755 |
+ |
|
chrM |
19 |
4343 |
Ptr_NumtS_686_b3 |
746 |
+ |
|
chrM |
19 |
4343 |
Ptr_NumtS_696_b1 |
745 |
- |
|
chrM |
19 |
4343 |
Ptr_NumtS_688_b3 |
745 |
+ |
|
chrM |
0 |
2183 |
Ptr_NumtS_684_b1 |
708 |
+ |
|
|
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|
Calabrese et al. BMC Bioinformatics 2012 13(Suppl 4):S15 doi:10.1186/1471-2105-13-S4-S15 |
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