Table 1

Improved protein identification using the organelle enrichment method (OEM) as compared traditional method (TM)

Protein Identified*

Peptide IDs*

Spectra Count*

Mitochondrial proteins

Percentage of mitochondrial proteins (%)


OEM 1

2956

21283

73181

228

7.71

OEM 2

3121

21848

68127

236

7.56

OEM 3

3221

21511

64458

201

6.24

TM sample 1

2880

20386

64733

179

6.22

TM sample 2

2732

19939

52752

170

6.22

TM sample 3

3081

20061

49211

181

5.87

The pair-wise student's t-test

0.0845

0.0295

0.04

<0.01


*All of the data are filtered and forward matches

Zhang et al. BMC Bioinformatics 2012 13(Suppl 15):S8   doi:10.1186/1471-2105-13-S15-S8

Open Data