Table 2

Two estimations of γ from three datasets

Data Set

Pairs of Experiments used in calculation

Standard Error1

MLE2


Caltech

6a

0.26

0.2

Chiang

3b

0.40

0.2

Bullard

12c

0.76

1.0


1 Obtained from slope in Figure 3

2 from maximizing likelihood Eq.(2)

a from four libraries of same biological sample

b from three knockout replicates and two wild type replicates

c by comparing two different libraries having four and three replicates

Cai et al. BMC Bioinformatics 2012 13(Suppl 13):S5   doi:10.1186/1471-2105-13-S13-S5

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