Table 4

Datasets used for evaluating ModuleMiner

Serial. No

Dataset

No. of Genes/ No. of Conditions

Source


1

Yeast Sporulation

474/17

http://cmgm.stanford.edu/pbrown/sporulation/index.html webcite

2

Yeast Diauxic Shift

689/72

Sample gene in expander

3

Subset of Yeast Cell Cycle

384/17

http://faculty.washington.edu/kayee/cluster webcite

4

Arabidopsis Thaliana

138/8

http://homes.esat.kuleuven.be/~sistawww/bioi/thijs/Work/Clustering.html webcite

5

Rat CNS

112/9

http://faculty.washington.edu/kayee/cluster webcite


The table 4 gives the description of various datasets used in ModuleMiner.

Mahanta et al. BMC Bioinformatics 2012 13(Suppl 13):S4   doi:10.1186/1471-2105-13-S13-S4

Open Data