Table 7

Performance of phylogenetic-based programs
Program % of sequence classified Sensitivity (%) Precision (%) CPU Runtime (minutes)
MLTreeMap1 0.9 0.8 81.4 3344
Treephyler1 6.6 6.3 95.7 7444

Measurements of sensitivity, precision, and resource consumption on the PhyloPythia 961 bp data set.

1analysis performed on an AMD Opteron 250 (2.4 GHz) Sun Fire V40z with 32 GB RAM.

Bazinet and Cummings

Bazinet and Cummings BMC Bioinformatics 2012 13:92   doi:10.1186/1471-2105-13-92

Open Data