Table 5

Learned query graph performance using the VirulentPred test set
Data src. Class. method AUC Accuracy
1-mer SVM(RBF) 0.786 0.710
VirulentPred 0.860 0.818
GenNav SVM(RBF) 0.940 0.868
GenNav Ridge regression 0.935 0.863
GenNav kNN 0.935 0.763

Comparison of the top-performing integrated predictor against a sequence baseline and VirulentPred; all methods outlined in the table used the same set of proteins.

Cadag et al.

Cadag et al. BMC Bioinformatics 2012 13:321   doi:10.1186/1471-2105-13-321

Open Data