Table 1

Comparing results between models in [[10]] and the new semiparametric model, for the data simulated under a biological model
Parametric regression [10] Semiparametric regression
30 sites with largest posterior mean <a onClick="popup('http://www.biomedcentral.com/1471-2105/13/278/mathml/M57','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2105/13/278/mathml/M57">View MathML</a> for h
    4
,
    5
, 6, 10,
    14
,
    18
,
    19
,
    21
, 22, 23,
    24
,
    33
,
    48
,
    52
,
    54
,
    59
,
    62
,
    64
,
    65
,
    67
,
    71
,
    74
,
    75
,
    77
,
    80
,
    81
,
    82
,
    84
,
    85
,
    89
    4
,
    5
,
    14
,
    18
,
    19
,
    21
,
    24
,
    33
, 37, 39,
    48
,
    52
,
    54
,
    59
,
    62
,
    64
,
    65
,
    67
,
    71
,
    72
,
    74
,
    75
,
    77
,
    80
,
    81
,
    82
,
    84
,
    85
,
    86
,
    89
30 sites with lowest posterior mean <a onClick="popup('http://www.biomedcentral.com/1471-2105/13/278/mathml/M58','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2105/13/278/mathml/M58">View MathML</a> for Mv
    5
,
    6
,
    7
,
    9
,
    16
,
    19
,
    24
,
    25
,
    26
,
    27
,
    28
,
    31
,
    32
,
    36
, 44,
    49
, 51,
    58
,
    59
,
    60
,
    61
,
    64
,
    65
,
    67
,
    79
,
    80
, 82,
    83
, 85,
    88
    5
,
    6
,
    7
,
    9
,
    16
, 18,
    19
,
    24
,
    25
,
    26
,
    27
,
    28
,
    31
,
    32
,
    34
,
    36
,
    38
,
    49
,
    58
,
    59
,
    60
,
    61
,
    64
,
    65
,
    67
,
    79
,
    80
,
    83
, 84,
    88

Sites marked in bold are the ones which are in the region of interest - for h this is where radical changes were encouraged and for Mvwhere small changes were encouraged while generating the sequences. Underlined sites are identified by both methods.

Datta et al.

Datta et al. BMC Bioinformatics 2012 13:278   doi:10.1186/1471-2105-13-278

Open Data