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Open Access Methodology article

Coupled mutation finder: A new entropy-based method quantifying phylogenetic noise for the detection of compensatory mutations

Mehmet Gültas1*, Martin Haubrock2, Nesrin Tüysüz3 and Stephan Waack1*

Author Affiliations

1 Institute of Computer Science, University of Göttingen, Goldschmidtstr. 7, Göttingen, 37077, Germany

2 Department of Bioinformatics, University of Göttingen, Goldschmidtstr. 1, 37077 Göttingen, Germany

3 Erasmus MC Stem Cell Institute, Department of Cell Biology, Erasmus Medical Center, Rotterdam, The Netherlands

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BMC Bioinformatics 2012, 13:225  doi:10.1186/1471-2105-13-225

Published: 11 September 2012

Additional files

Additional file 1:

EGFR significant sites. CMF-significant residue sites of the human epidermal growth factor receptor (EGFR) protein.

Format: ODS Size: 14KB Download file

Open Data

Additional file 2:

GCK significant sites. CMF-significant residue sites of the human glucokinase (GCK) protein.

Format: ODS Size: 14KB Download file

Open Data

Additional file 3:

Pdb entries of training MSAs. Pdb entries of redundancy free data set.

Format: TXT Size: 14KB Download file

Open Data