Table 3

Six different models used for detection of pauses
Model Features
A No sequence-dependent pause sites.
B Pause site at nucleotide 500.
C Pause site at nucleotide 250.
D Pause site at nucleotide 750.
E Pause site with mean duration <a onClick="popup('http://www.biomedcentral.com/1471-2105/13/152/mathml/M50','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2105/13/152/mathml/M50">View MathML</a> s at nucleotide 500.
F Pause site with mean duration <a onClick="popup('http://www.biomedcentral.com/1471-2105/13/152/mathml/M51','MathML',630,470);return false;" target="_blank" href="http://www.biomedcentral.com/1471-2105/13/152/mathml/M51">View MathML</a> s at nucleotide 500.

The six models with different pause characteristics are considered for the purposes of detection and classification of sequence dependent pauses.

Emmert-Streib et al.

Emmert-Streib et al. BMC Bioinformatics 2012 13:152   doi:10.1186/1471-2105-13-152

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