Table 1

Total number of annotations and the number of distinct GO identifiers for each of the data sets used in the study in terms of three separate sub-ontologies
Species Sub-Ontology GOA
Total number of annotations The number of distinct GO IDs
Hs CC 51,640 889
MF 55,781 2,844
BP 58,320 5,259
Mm CC 45,933 641
MF 60,919 2,318
BP 59,133 4,239
Dr CC 23,179 304
MF 47,651 1,187
BP 34,158 1,513
Sc CC 29,563 626
MF 26,292 1,611
BP 31,797 1,963
Rn CC 53,342 50
MF 63,050 2,776
BP 74,943 5,411

CC – Cellular Component sub-ontology, MF - Molecular Function sub-ontology and BP - Biological Process sub-ontology. Homo sapiens (Hs), Mus musculus (Mm), Danio rerio (Dr), Saccharomyces cerevisiae (Sc), Rattus norvegicus (Rn).

Kalankesh et al.

Kalankesh et al. BMC Bioinformatics 2012 13:127   doi:10.1186/1471-2105-13-127

Open Data