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Resolution: standard / high Figure 3.
Relationships decomposed into components. “Eye diagram” showing the top 10 significant CCA components ordered by correlation
from top to bottom (middle), VolSurf descriptors (left), and top gene sets (right).
The CCA components are shown as circles, with numbers indicating the decreasing order
of canonical correlation and letters A and B indicating subcomponents (A: positive
canonical score, B: negative canonical score). The widths of the curves from the components
to VolSurf descriptors and gene sets indicate the strength of the corresponding associations.
For VolSurf descriptors the subcomponent-specific activity is shown, whereas for the
gene sets we show the overall activity in the component. For an example compound,
VolSurf fields are illustrated in the top-left corner while three gene sets are listed
along with their five most significant genes in the top right corner.
Khan et al. BMC Bioinformatics 2012 13:112 doi:10.1186/1471-2105-13-112 |