Articles

BMC Bioinformatics publishes selected collections of research articles, conference proceedings, reviews and reports as supplements, which are free to access online. All articles published in supplements are subject to peer review; meeting abstracts undergo review and selection by the conference. Find out more about publishing a supplement with BioMed Central.

Volume 12 Supplement 14

22nd International Conference on Genome Informatics: Bioinformatics

Proceedings

22nd International Conference on Genome Informatics

Busan, Korea

5-7 December 2011

Edited by Sanghyuk Lee, Dongsup Kim, and KiYoung Lee

Additional Information | Conference website

MUCHA: multiple chemical alignment algorithm to identify building block substructures of orphan secondary metabolites

Masaaki Kotera, Toshiaki Tokimatsu, Minoru Kanehisa, Susumu Goto BMC Bioinformatics 2011, 12(Suppl 14):S1 (14 December 2011)

Abstract | Full text | PDF | PubMed

Optimizing de novo transcriptome assembly from short-read RNA-Seq data: a comparative study

Qiong-Yi Zhao, Yi Wang, Yi-Meng Kong, Da Luo, Xuan Li, Pei Hao BMC Bioinformatics 2011, 12(Suppl 14):S2 (14 December 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Enumerating tree-like chemical graphs with given upper and lower bounds on path frequencies

Masaaki Shimizu, Hiroshi Nagamochi, Tatsuya Akutsu BMC Bioinformatics 2011, 12(Suppl 14):S3 (14 December 2011)

Abstract | Full text | PDF | PubMed

Development, evaluation and application of 3D QSAR Pharmacophore model in the discovery of potential human renin inhibitors

Shalini John, Sundarapandian Thangapandian, Mahreen Arooj, Jong Hong, Kwang Kim, Keun Lee BMC Bioinformatics 2011, 12(Suppl 14):S4 (14 December 2011)

Abstract | Full text | PDF | PubMed

Integrative analysis workflow for the structural and functional classification of C-type lectins

Geoffrey Koh, Ariana Low, Daren Poh, Yujian Yao, Say Ng, Victor Wong, Vincent Vagenende, Kong-Peng Lam, Dong-Yup Lee BMC Bioinformatics 2011, 12(Suppl 14):S5 (14 December 2011)

Abstract | Full text | PDF | PubMed

iGepros: an integrated gene and protein annotation server for biological nature exploration

Guangyong Zheng, Haibo Wang, Chaochun Wei, Yixue Li BMC Bioinformatics 2011, 12(Suppl 14):S6 (14 December 2011)

Abstract | Full text | PDF | PubMed

ClipCrop: a tool for detecting structural variations with single-base resolution using soft-clipping information

Shin Suzuki, Tomohiro Yasuda, Yuichi Shiraishi, Satoru Miyano, Masao Nagasaki BMC Bioinformatics 2011, 12(Suppl 14):S7 (14 December 2011)

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Identification of ubiquitin/ubiquitin-like protein modification from tandem mass spectra with various PTMs

Chiyong Kang, Gwan-Su Yi BMC Bioinformatics 2011, 12(Suppl 14):S8 (14 December 2011)

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A new protein-ligand binding sites prediction method based on the integration of protein sequence conservation information

Tianli Dai, Qi Liu, Jun Gao, Zhiwei Cao, Ruixin Zhu BMC Bioinformatics 2011, 12(Suppl 14):S9 (14 December 2011)

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A protein-dependent side-chain rotamer library

Md Shariful Bhuyan, Xin Gao BMC Bioinformatics 2011, 12(Suppl 14):S10 (14 December 2011)

Abstract | Full text | PDF | PubMed