Table 2

Performance of the Bayesian regression approach on individual data sources.

Random Control

Linkage Interval


Mean Rank Ratio (SD)

AUC (SD)

Mean Rank Ratio

AUC


HPRD

0.1349 (0.0004)

0.8738 (0.0004)

0.1353

0.8720

BioGRID

0.1466(0.0003)

0.8620 (0.0003)

0.1495

0.8577

BIND

0.1557(0.0007)

0.8528 (0.0008)

0.1556

0.8517

IntAct

0.1618(0.0004)

0.8466 (0.0004)

0.1623

0.8448

MINT

0.1665(0.0006)

0.8419 (0.0006)

0.1674

0.8398


Results are obtained using diffusion kernel (γ=0.2) with Bayesian prior µ=0 and σi =1 (for i ≥ 1). Results for the validation of random controls are mean (standard deviation) of 10 independent runs.

Zhang et al. BMC Bioinformatics 2011 12(Suppl 1):S11   doi:10.1186/1471-2105-12-S1-S11

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