Table 3

RPISeq predictions on NPInter dataset using RF and SVM classifiers trained on RPI369

Organism

Total RPI pairs

Pairs predicted by RF (%)

Pairs predicted by SVM (%)


H. sapiens

1189

808 (68.0)

988 (83.1)


S. cerevisiae

254

168 (66.1)

226 (89.0)


M. musculus

120

81 (67.5)

111 (92.5)


D. melanogaster

81

38 (46.9)

53 (65.4)


E. coli

37

20 (54.0)

24 (64.9)


Total

1681

1115 (66.3)

1402 (83.4)


RPISeq predictions on interactions derived from the NPInter database for five model organisms.

Muppirala et al. BMC Bioinformatics 2011 12:489   doi:10.1186/1471-2105-12-489

Open Data