Open Access Research article

A multifaceted analysis of HIV-1 protease multidrug resistance phenotypes

Kathleen M Doherty1, Priyanka Nakka1, Bracken M King2, Soo-Yon Rhee3, Susan P Holmes4, Robert W Shafer3 and Mala L Radhakrishnan1*

Author Affiliations

1 Department of Chemistry, Wellesley College, 106 Central Street, Wellesley, MA 02481, USA

2 Department of Biological Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA 02139, USA

3 Division of Infectious Diseases, Department of Medicine, Stanford University, 300 Pasteur Drive, Stanford, CA, 94305, USA

4 Department of Statistics, Stanford University, Sequoia Hall, Stanford, CA 94305, USA

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BMC Bioinformatics 2011, 12:477  doi:10.1186/1471-2105-12-477

Published: 15 December 2011

Additional files

Additional file 1:

Contains the formal integer-programming formulations used within the work, five supplementary figures (Figures S1-S5) and one supplementary table (Table S1). This file also contains a link to a website containing the n = 398 data set used in this work. (http://www.wellesley.edu/Chemistry/Radhakrishnan/projects.html webcite).

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