Table 3

Top 20 k-mers ranked by different distances on motif sequences on STAT1 dataset

STAT1 Motif

KL

Bhattacharyya

Hellinger


aata

atat

aata

ttaa

tata

ttaa

aaat

aata

aaat

aaaa

ttaa

aaaa

ggaa

atta

ggaa

atat

aaat

atat

atac

taaa

atac

tcaa

atac

tcaa

aatt

aatt

aatt

acat

ataa

acat

taca

taca

taca

aggg

cata

aggg

cgga

aaaa

cgga

atta

attg

atta

attg

acat

attg

taga

tcaa

taga

caaa

agcg

caaa

acta

gata

acta

ccag

taga

ccag

agca

cgga

agca


Pinello et al. BMC Bioinformatics 2011 12:408   doi:10.1186/1471-2105-12-408

Open Data