Table 1

Reactions and Propensity Functions for the Stochastic lac Operon Model

Reaction

Propensity Function1, 2, 3


(1-1)

(1-2)

(1-3)

(1-4)

(1-5)

(1-6)

(1-7)

(1-8)

(1-9)

(1-10)

(1-11)

(1-12)

(1-13)

(1-14)

(1-15)

(1-16)

(1-17)

(1-18)

(1-19)

(1-20)

(1-21)

(1-22)

(1-23)

(1-24)

(1-25)


1 Variables without brackets denote number of molecules of the corresponding species.

2 All propensity functions have units of min-1.

3 Avogadro's number: NA = 6.0221367ยท1014 nmol-1.

Stamatakis and Zygourakis BMC Bioinformatics 2011 12:301   doi:10.1186/1471-2105-12-301

Open Data