Table 4

Quality control of AML samples annotated on refseq, Human hg19

Blood1

Blood2

Blood3

Blood4

Blood5

Blood6

Blood7

Blood8

Blood9


mde

48

47

50

47

87

86

99

102

95


ec5 (%)

65

68

67

69

69

69

69

69

69


ec10(%)

61

65

65

66

66

66

67

67

67


Bone1

Bone2

Bone3

Bone4

Bone5

Bone6

Bone7

Bone8

Bone9


mde

46

45

44

44

79

86

75

77

117


ec5 (%)

68

68

68

69

69

69

68

68

70


ec10(%)

65

65

65

65

67

66

66

65

68


mde: mean depth on exons; ed5: percentage of exons with at average depth greater than 5; ed10: percentage of exons with at average depth greater than 10;

Deng BMC Bioinformatics 2011 12:267   doi:10.1186/1471-2105-12-267

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