Table 2

Comparision of prediction performance of BEOracle with BCPred and Bepipred on peptide antibodies used in modENCODE project

modENCODE

BEOracle

BCPred

Bepipred


Rabbit anti-Stat92E

1

1

0


HDAC6-497

1

1

0


HDAC3-499

1

0

0


HDAC1-501

1

0

1


Egg (Kang)

1

1

0


chinmo 70850

1

0

1


CP190

1

0

0


CTCF-C

1

0

0


sens

1

1

1


HP1 wa191

1

1

0


CTCF-N

0

1

1


HP1 wa192

1

1

1


HDAC4a-492

1

0

1


HA

1

0

1


HDAC1-500

1

1

1


HP1c (Henikoff)

1

1

0


HDAC6-496

1

1

1


HDAC3-498

1

0

1


HDAC11-495

1

1

1


JL00012_DPY28

1

1

1


POF

1

1

1


BEAF-32

1

0

0


HDAC11-494

1

1

0


HDAC4a-493

1

0

0


anti-HTZ-1

1

1

1


HP1b (Henikoff)

1

1

1


Wang et al. BMC Bioinformatics 2011 12:251   doi:10.1186/1471-2105-12-251

Open Data