Table 1

Number of SNPs with estimated MAF larger than 2% using a particular method (row) within each bin (column) defined by average sequence depth across individuals.

0.5×-3×

3×-6×

6×-9×

9×-12×

12×-25×


ML (unknown)

18324

12564

9102

6778

11862

ML (known)

15282

11482

8742

6651

11810

Call NF

123546

63415

19516

9695

13035

Call F

391488

21511

10018

7145

12026


Kim et al. BMC Bioinformatics 2011 12:231   doi:10.1186/1471-2105-12-231

Open Data