Email updates

Keep up to date with the latest news and content from BMC Bioinformatics and BioMed Central.

Open Access Highly Accessed Software

easyDAS: Automatic creation of DAS servers

Bernat Gel Moreno12*, Andrew M Jenkinson2, Rafael C Jimenez2, Xavier Messeguer Peypoch1 and Henning Hermjakob2

Author Affiliations

1 Software Department, UPC-BarcelonaTech, Barcelona, Spain

2 European Bioinformatics Institute, Hinxton, Cambridge, UK

For all author emails, please log on.

BMC Bioinformatics 2011, 12:23  doi:10.1186/1471-2105-12-23

Published: 18 January 2011

Abstract

Background

The Distributed Annotation System (DAS) has proven to be a successful way to publish and share biological data. Although there are more than 750 active registered servers from around 50 organizations, setting up a DAS server comprises a fair amount of work, making it difficult for many research groups to share their biological annotations. Given the clear advantage that the generalized sharing of relevant biological data is for the research community it would be desirable to facilitate the sharing process.

Results

Here we present easyDAS, a web-based system enabling anyone to publish biological annotations with just some clicks. The system, available at http://www.ebi.ac.uk/panda-srv/easydas webcite is capable of reading different standard data file formats, process the data and create a new publicly available DAS source in a completely automated way. The created sources are hosted on the EBI systems and can take advantage of its high storage capacity and network connection, freeing the data provider from any network management work. easyDAS is an open source project under the GNU LGPL license.

Conclusions

easyDAS is an automated DAS source creation system which can help many researchers in sharing their biological data, potentially increasing the amount of relevant biological data available to the scientific community.