Table 3

Summary of CNV regions on chromosome 22 using HMM algorithm for 1,266 subjects that passed PennCNV and CRLMM QC metrics

Software

Number CNVs

Duplications

Deletions

Median Number CNVs per patient (Min, 25%, 75%, Max)


CRLMM/VanillaIce

45,757

7,958

37,799

30 (4, 21, 42, 438)


PennCNV

50,908

16,132

34,776

39 (13, 31, 48, 96)


Eckel-Passow et al. BMC Bioinformatics 2011 12:220   doi:10.1186/1471-2105-12-220

Open Data