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Open Access Highly Accessed Methodology article

A novel and well-defined benchmarking method for second generation read mapping

Manuel Holtgrewe*, Anne-Katrin Emde, David Weese and Knut Reinert

BMC Bioinformatics 2011, 12:210  doi:10.1186/1471-2105-12-210

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Errata to section "Matches as Equivalence Classes"

Manuel Holtgrewe   (2012-03-05 13:02)  Freie Universit��t Berlin

There is an error in the section "Matches as Equivalence Classes". Particularly, the definition of match equivalence is flawed.

This has been fixed in an erratum which is available on Rabema's project website This page also contains a document with additional material and extended proofs regarding the valid definitions in the original paper and the changed definition.

Competing interests

None declared


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