Genotype calling in tetraploid species from bi-allelic marker data using mixture models
1 Plant Breeding Department, Wageningen University and Research Centre, Wageningen, The Netherlands
2 Biometris, Wageningen University and Research Centre, Wageningen, The Netherlands
3 Centre for BioSystems Genomics, P.O. Box 98, 6700 AB Wageningen, The Netherlands
BMC Bioinformatics 2011, 12:172 doi:10.1186/1471-2105-12-172Published: 19 May 2011
Additional file 1:
The fitTetra R package. Additional file 1: "fitTetra_1.0.tar.gz" contains the R package fitTetra described in this article, performing the mixture model fitting and model selection. It contains the tetraploid and diploid data used in this article and includes detailed help pages describing the use, input and output of the three user functions. FitTetra is distributed under the GNU Public License http://www.gnu.org/ webcite and is also available from http://www.plantbreeding.wur.nl/UK/software.html webcite. Note that the downloaded file should be renamed to "fitTetra_1.0.tar.gz" before installing the package.
Format: GZ Size: 968KB Download file
Additional file 2:
A compiled version of the fitTetra R package. Additional file 2: "fitTetra_1.0.zip" contains the fitTetra package compiled for the Windows operating system. Note that the downloaded file should be renamed to "fitTetra_1.0.zip" before installing the package.
Format: ZIP Size: 998KB Download file
Additional file 3:
Comparison of fitTetra and beadarrayMSV. Additional file 3 "Comparison of fitTetra and beadarrayMSV.pdf"describes the comparison that was made between fitTetra and beadarrayMSV, using the potato data from this article and the salmon data from .
Format: PDF Size: 13KB Download file
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