Figure 7.

Estimated g-functions, reverse direction, ENCODE data. Plots of the-functions modeling the effect of the occurrence of one TRE (row) on the occurrence of another TRE (column), estimated in the reverse direction. Note that the figure is transposed compared to Figure 5. The effects are estimated in the multivariate model adjusting for the histone modifications and allowing for different baseline intensities for the ENCODE regions. A value less than one indicates that this inter-TRE distance tends not to occur while a value greater than one indicates an inter-TRE distance that is likely. Point-wise 95% confidence intervals for the functions are also shown.

Carstensen et al. BMC Bioinformatics 2010 11:456   doi:10.1186/1471-2105-11-456
Download authors' original image