Figure 2.

Mean FDR curves for different numbers of libraries and degrees of differential expression. Mean FDR curves, based on 100 simulations, comparing the performance of multiple methods in identifying pairwise differential expression. The data contain 1000 truly DE tuples and 9000 non-DE tuples and are simulated with varying number of libraries n₁ and n₂, different degrees of differential expression b, and randomly chosen dispersions for each tuple (~ Γ (0.85, 0.5)).