Table 2

Mixture fractions averaged by tumor type for a six component inference.

Comp. 1

Comp. 2

Comp. 3

Comp. 4

Comp. 5

Comp. 6


Normal

0.4017

0.1134

0.0993

0.0563

0.2338

0.0955


Adenocarcinoma

0.2625

0.1748

0.0960

0.0627

0.2556

0.1483


Small cell (cell lines)

0.1585

0.0705

0.2818

0.0645

0.3151

0.1095


Small cell (primary)

0.2539

0.0677

0.1913

0.0301

0.3252

0.1317


Carcinoid

0.1670

0.0674

0.1681

0.2868

0.2358

0.0747


Large cell neuroendocrine

0.2591

0.1206

0.1955

0.0434

0.2977

0.0838


Large cell carcinoma

0.2461

0.2110

0.1264

0.0257

0.2852

0.1056


Combined SCLC/AD

0.1270

0.2000

0.1425

0.0695

0.0938

0.3672


Columns correspond to mixture components from a six-component inference. Rows correspond to distinct tumor types, as annotated by Jones et al. [[33]].

Schwartz and Shackney BMC Bioinformatics 2010 11:42   doi:10.1186/1471-2105-11-42

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