Open Access Highly Accessed Research article

Nonparametric identification of regulatory interactions from spatial and temporal gene expression data

Anil Aswani1*, Soile VE Keränen2, James Brown3, Charless C Fowlkes4, David W Knowles2, Mark D Biggin2, Peter Bickel3 and Claire J Tomlin1

Author Affiliations

1 Electrical Engineering and Computer Sciences, University of California, Berkeley, CA, USA

2 Genomics and Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA

3 Statistics, University of California, Berkeley, CA, USA

4 Computer Science, University of California, Irvine, CA, USA

For all author emails, please log on.

BMC Bioinformatics 2010, 11:413  doi:10.1186/1471-2105-11-413

Published: 4 August 2010

Additional files

Additional file 1:

Supplementary material. Full set of Factor Activity plots generated with both cross-validation-selected and fixed window sizes.

Format: PDF Size: 1.5MB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data